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Advances in tissue engineering of cancer microenvironment-from three-dimensional culture to three-dimensional printing

  • Author Footnotes
    1 Joana Rita Oliveira Faria Marques and Patricia González-Alva have equally contributed to the work.
    Joana Rita Oliveira Faria Marques
    Footnotes
    1 Joana Rita Oliveira Faria Marques and Patricia González-Alva have equally contributed to the work.
    Affiliations
    Oral Biology and Biochemistry Research Group (GIBBO), Unidade de Investigação em Ciências Orais e Biomédicas (UICOB), Faculdade de Medicina Dentária, Universidade de Lisboa, Lisboa, Portugal
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  • Author Footnotes
    1 Joana Rita Oliveira Faria Marques and Patricia González-Alva have equally contributed to the work.
    Patricia González-Alva
    Footnotes
    1 Joana Rita Oliveira Faria Marques and Patricia González-Alva have equally contributed to the work.
    Affiliations
    Tissue Bioengineering Laboratory, Postgraduate Studies and Research Division, Faculty of Dentistry, National Autonomous University of Mexico (UNAM), 04510, Mexico, CDMX, Mexico
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  • Ruby Yu-Tong Lin
    Affiliations
    Faculty of Dentistry, National University of Singapore, Singapore
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  • Beatriz Ferreira Fernandes
    Affiliations
    Oral Biology and Biochemistry Research Group (GIBBO), Unidade de Investigação em Ciências Orais e Biomédicas (UICOB), Faculdade de Medicina Dentária, Universidade de Lisboa, Lisboa, Portugal
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  • Akhilanand Chaurasia
    Affiliations
    Department of Oral Medicine, Faculty of Dental Sciences, King George's Medical University, Lucknow, Uttar Pradesh, India
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  • Nileshkumar Dubey
    Correspondence
    Corresponding author.
    Affiliations
    Faculty of Dentistry, National University of Singapore, Singapore

    ORCHIDS: Oral Care Health Innovations and Designs Singapore, National University of Singapore, Singapore
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  • Author Footnotes
    1 Joana Rita Oliveira Faria Marques and Patricia González-Alva have equally contributed to the work.
Open AccessPublished:April 03, 2023DOI:https://doi.org/10.1016/j.slast.2023.03.005

      Abstract

      Cancer treatment development is a complex process, with tumor heterogeneity and inter-patient variations limiting the success of therapeutic intervention. Traditional two-dimensional cell culture has been used to study cancer metabolism, but it fails to capture physiologically relevant cell-cell and cell-environment interactions required to mimic tumor-specific architecture. Over the past three decades, research efforts in the field of 3D cancer model fabrication using tissue engineering have addressed this unmet need. The self-organized and scaffold-based model has shown potential to study the cancer microenvironment and eventually bridge the gap between 2D cell culture and animal models. Recently, three-dimensional (3D) bioprinting has emerged as an exciting and novel biofabrication strategy aimed at developing a 3D compartmentalized hierarchical organization with the precise positioning of biomolecules, including living cells. In this review, we discuss the advancements in 3D culture techniques for the fabrication of cancer models, as well as their benefits and limitations. We also highlight future directions associated with technological advances, detailed applicative research, patient compliance, and regulatory challenges to achieve a successful bed-to-bench transition.

      Keywords

      1. Introduction

      Cancer is a major disease burden worldwide, with 19.3 million new cases and 10 million deaths in 2020, resulting in devastating health, economic consequences and is a major impediment to increasing life expectancy [
      • Sung H.
      • Ferlay J.
      • Siegel R.L.
      • et al.
      Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
      ]. Although this is a significant and growing issue, the mechanisms of cancer initiation, development, and metastasis remain poorly understood. Moreover, the native cancer microenvironment (CME) is highly dynamic, with distinct extracellular matrix (ECM), cell–cell contact, and cell–matrix interactions that vary according to disease stage and regulate cancer growth, angiogenesis, aggression, invasion, and metastasis [
      • Amos S.E.
      • Choi Y.S.
      The cancer microenvironment: mechanical challenges of the metastatic cascade.
      ,
      • Dominiak A.
      • Chełstowska B.
      • Olejarz W.
      • et al.
      Communication in the cancer microenvironment as a target for therapeutic interventions.
      ]. This complex interplay of several biological factors that contribute to disease progression makes cancer management problematic [
      • Król M.
      • Pawłowski K.
      • Majchrzak K.
      • et al.
      Why chemotherapy can fail.
      ]
      Monolayer culture of cells in two-dimensional culture (2D) and in vivo animal model is a traditional technique to study cancer-related microenvironment in cancer pathogenesis [
      • Kapałczyńska M.
      • Kolenda T.
      • Przybyła W.
      • et al.
      2D and 3D cell cultures–a comparison of different types of cancer cell cultures.
      ]. While the 2D model is cost-effective and simple to implement, it does not replicate the microenvironment and architecture (including cell-cell interactions and junctions) of a tumor in vivo [
      • Radajewska A.
      • Przybyszewski O.
      • Emhemmed F.
      • et al.
      Three dimensional in vitro culture systems in anticancer drug discovery targeted on cancer stem cells.
      ,
      • Jensen C.
      • Teng Y.
      Is it time to start transitioning from 2D to 3D cell culture?.
      ]. Animal models can overcome these limitations; however, they are expensive, time-consuming, and often involve intricate surgeries. Most importantly, owing to the lack of human cells and their immune response, they fail to mimic human physiology, resulting in a failure to translate pre-clinical findings. In addition, several ethical concerns regarding animal welfare are also being raised; therefore, the use of animal models needs to be rationally and carefully managed [
      • Workman P.
      • Aboagye E.
      • Balkwill F.
      • et al.
      Guidelines for the welfare and use of animals in cancer research.
      ]. To address the drawbacks of both above mentioned model intermediate three-dimensional (3D) models known as spheroids, organoids and gel embedding were developed to mimic cancer microenvironment [
      • Jensen C.
      • Teng Y.
      Is it time to start transitioning from 2D to 3D cell culture?.
      ,
      • Augustine R.
      • Kalva S.N.
      • Ahmad R.
      • et al.
      3D Bioprinted cancer models: revolutionizing personalized cancer therapy.
      ]
      Recent advances in tissue engineering have shown that an in vitro model can be developed to map realistic in vivo niches of cancerous tissues, allowing for a better understanding of the disease and the development of novel cancer treatment approaches [
      • Augustine R.
      • Kalva S.N.
      • Ahmad R.
      • et al.
      3D Bioprinted cancer models: revolutionizing personalized cancer therapy.
      ,
      • Jain P.
      • Kathuria H.
      • Dubey N.
      Advances in 3D bioprinting of tissues/organs for regenerative medicine and in-vitro models.
      ,
      • Barbosa M.A.
      • Xavier C.P.
      • Pereira R.F.
      • et al.
      3D cell culture models as recapitulators of the tumor microenvironment for the screening of anti-cancer drugs.
      ]. These new platforms have been exploited to recapitulate the composition, architecture, and biomolecule presentation of native tissues ex vivo for in vivo implantation. Importantly, well-defined natural and synthetic scaffold-based tissue-engineered constructs (TECs) can mimic extracellular matrices and direct cell fate by promoting cell-matrix interactions [
      • Hutmacher D.W.
      Biomaterials offer cancer research the third dimension.
      ,
      • Thakuri P.S.
      • Liu C.
      • Luker G.D.
      • et al.
      Biomaterials-Based Approaches to Tumor Spheroid and Organoid Modeling.
      ]. The porous scaffold with different mechano-chemical properties can increase the culture efficiency and cell functions. With the advancement in 3D printing technologies to create perfusable networks and cell positions in a high-throughput manner to better mimic the cancer microenvironment [
      • Herrmann D.
      • Conway J.R.
      • Vennin C.
      • et al.
      Three-dimensional cancer models mimic cell–matrix interactions in the tumour microenvironment.
      ,
      • Pape J.
      • Emberton M.
      • Cheema U.
      3D cancer models: the need for a complex stroma, compartmentalization and stiffness.
      ]. This is especially important for recreating a functional cancer microenvironment that represents the 3D structure, stromal environment, and signaling milieu found in vivo.
      In this three-part review, we discuss innovations in 3D cancer models to study the cancer microenvironment. In the first part, conventional approaches for generating cell aggregates, including spheroids (such as those formed through hanging-drop, overlay on agarose, and spinneret flasks) and organoids (which can be derived from patient-derived cancer organoids and organ-on-chip) are discussed. The second part evaluates how distinct biomaterials can be used to recreate the complex cancer microenvironment to study the disease. This includes recent work on 3D printing to render a microenvironment with controlled 3D architecture and biological features to develop functional models. Finally, we highlight the future direction with the utilization of biomaterial and 3D bioprinting technologies to develop biomimetic cancer models with effective translation to clinic.

      2. Conventional approaches to fabricate in vitro 3D cancer models

      Over the years, 3D culture models have been developed to understand cell-cell and cell-extracellular matrix interactions in the tumor microenvironment. Self-organized 3D models (Fig 1) are the most common methods for tissue engineering of cell-rich organotypic 3D tumor models [
      • Kapałczyńska M.
      • Kolenda T.
      • Przybyła W.
      • et al.
      2D and 3D cell cultures–a comparison of different types of cancer cell cultures.
      ,
      • Rashidi M.R.W.
      • Mehta P.
      • Bregenzer M.
      • et al.
      Engineered 3D model of cancer stem cell enrichment and chemoresistance.
      ]. These models have exhibited better immunomodulatory, proliferative, and activation abilities than 2D cultures, thus having a tremendous impact on studying the cancer microenvironment (Table 1).
      Fig 1
      Fig 1Schematic showing the structure and distinctions between the spheroid and organoid 3D culture for tumor microenvironment.
      Table 1Comparison of conventional approaches in vitro 3D cancer model types.
      CultureProsConsReference
      SpheroidEasy techniqueIgnores noncancerous parenchymal cells and the tumor stroma.[
      • Sant S.
      • Johnston P.A.
      The production of 3D tumor spheroids for cancer drug discovery.
      ,
      • Peirsman A.
      • Blondeel E.
      • Ahmed T.
      • et al.
      MISpheroID: a knowledgebase and transparency tool for minimum information in spheroid identity.
      ,
      • Rodoplu D.
      • Matahum J.S.
      • Hsu C.-.H.
      A microfluidic hanging drop-based spheroid co-culture platform for probing tumor angiogenesis.
      ,
      • Breslin S.
      • O'Driscoll L.
      Three-dimensional cell culture: the missing link in drug discovery.
      ,
      • Das V.
      • Fürst T.
      • Gurská S.
      • et al.
      Evaporation-reducing culture condition increases the reproducibility of multicellular spheroid formation in microtiter plates.
      ,
      • Barrila J.
      • Radtke A.L.
      • Crabbé A.
      • et al.
      Organotypic 3D cell culture models: using the rotating wall vessel to study host–pathogen interactions.
      ]
      Ability for co-culture
      High reproducibility
      Possible to detect and distinguish subpopulations.Medium replacement is inconvenient or causes cellular damage.
      Low-cost technique
      The necessity to obtain a single cell type by using flow cytometry analysis or limiting dilution protocol.
      OrganoidSeveral cell linesRequires qualified personnel.[
      • Radajewska A.
      • Przybyszewski O.
      • Emhemmed F.
      • et al.
      Three dimensional in vitro culture systems in anticancer drug discovery targeted on cancer stem cells.
      ,
      • Aberle M.R.
      • Burkhart R.A.
      • Tiriac H.
      • et al.
      Patient-derived organoid models help define personalized management of gastrointestinal cancer.
      ,
      • Chitturi Suryaprakash R.T.
      • Kujan O.
      • Shearston K.
      • et al.
      Three-dimensional cell culture models to investigate oral carcinogenesis: a scoping review.
      ,
      • Bleijs M.
      • van de Wetering M.
      • Clevers H.
      • et al.
      Xenograft and organoid model systems in cancer research.
      ,
      • Zhao H.
      • Yan C.
      • Hu Y.
      • et al.
      Differentiated cancer cell-originated lactate promotes the self-renewal of cancer stem cells in patient-derived colorectal cancer organoids.
      ]
      Cellular and phenotypic heterogeneityDifficulties in providing long-term cultures.
      Well-organized tissue structureHigh-cost technique.
      Allows the creation of biobanksNot all primary cells can readily be cultured as organoids.
      Lack of an immune competent environment.

      2.1 Spheroids

      Spheroids are defined as self-assembled clusters of cell colonies that have some tissue-like organization, with cell-cell interactions dominating cell-substrate interactions [
      • Weiswald L.-.B.
      • Bellet D.
      Dangles-Marie, V. Spherical cancer models in tumor biology.
      ]. These structures (> 500 μm) comprise three concentric layers of cells with distinct properties: internal necrotic layer due to the hypoxic core, intermediate quiescent layer, and external proliferative layer [
      • Edin H.Y.S.
      • Al-Haj N.A.
      • Rasedee A.
      • et al.
      Recombinant human Erythropoietin enhanced the cytotoxic effects of tamoxifen toward the spheroid MCF-7 breast cancer cells.
      ,
      • Vinci M.
      • Gowan S.
      • Boxall F.
      • et al.
      Advances in establishment and analysis of three-dimensional tumor spheroid-based functional assays for target validation and drug evaluation.
      ]. Tumor spheroids for drug screening can be generated by clonal expansion or through cell aggregation. For clonal expansion, single cells are immobilized in a hydrogel matrix, such as Matrigel polyethylene glycol (PEG) or fibrin, or by loading cells at a higher density into hydrogel microspheres [
      • Bruns J.
      • Zustiak S.P.
      Hydrogel-based spheroid models of glioblastoma for drug screening applications.
      ]. For in vitro spheroid production in a simpler and faster manner, the most commonly used methods are based on inhibiting cell-surface interactions through a non-adherent environment: the hanging drop method, the use of low-attachment plates, overlay on agarose, and rotary cell culture [
      • Sant S.
      • Johnston P.A.
      The production of 3D tumor spheroids for cancer drug discovery.
      ,
      • Peirsman A.
      • Blondeel E.
      • Ahmed T.
      • et al.
      MISpheroID: a knowledgebase and transparency tool for minimum information in spheroid identity.
      ]. Although these methods are scaffold-free in principle, some more recent protocols incorporate the use of scaffolds [
      • Bruns J.
      • Zustiak S.P.
      Hydrogel-based spheroid models of glioblastoma for drug screening applications.
      ]. In the following sections, these methods are described and discussed, along with their limitations and strengths.

      2.1.1 Hanging drop (HD)

      The hanging drop (HD) method has been used extensively based on its simple and high-throughput protocols that enable the screening of many molecules/conditions. Briefly, a small volume (20 μL to 50 μL) of cell suspension was pipetted onto a Petri dish or a multi-well special plate lid, which can be covered by an amphiphilic surfactant coating [
      • Radajewska A.
      • Przybyszewski O.
      • Emhemmed F.
      • et al.
      Three dimensional in vitro culture systems in anticancer drug discovery targeted on cancer stem cells.
      ]. The lid was then inverted, and by the combined effects of gravity and surface tension (water-air interface), the cells were allowed to aggregate at the bottom of the droplet over time [
      • Gupta P.
      • Kar S.
      • Kumar A.
      • et al.
      Pulsed laser assisted high-throughput intracellular delivery in hanging drop based three dimensional cancer spheroids.
      ]. The lid was inverted on a lower well containing medium or water to ensure adequate humidity to avoid drying of the plate [
      • Radajewska A.
      • Przybyszewski O.
      • Emhemmed F.
      • et al.
      Three dimensional in vitro culture systems in anticancer drug discovery targeted on cancer stem cells.
      ].
      Due to its simplicity, low-cost and repeatability, this method is by far the most used in the literature for cancer spheroid generation. Several cell lines and primary cells modeling different cancer types have been proved to be able to generate spheroids using HD, including breast cancer (MDA-MB-231, BT-474, MCF-7, ES-D3) [
      • Badea M.A.
      • Balas M.
      • Dinischiotu A.
      Biological properties and development of hypoxia in a breast cancer 3D model generated by hanging drop technique.
      ,
      • Ata F.K.
      • Yalcin S.
      The cisplatin, 5-Fluorouracil, irinotecan, and gemcitabine treatment in resistant 2D and 3D Model Triple Negative Breast Cancer Cell line: ABCG2 expression data.
      ], colorectal cancer (HT-29, HCT116, Caco-2) [
      • Reidy E.
      • Leonard N.A.
      • Treacy O.
      • et al.
      A 3D view of colorectal cancer models in predicting therapeutic responses and resistance.
      ,
      • Rousset N.
      • Sandoval R.L.
      • Modena M.M.
      • et al.
      Modeling and measuring glucose diffusion and consumption by colorectal cancer spheroids in hanging drops using integrated biosensors.
      ], cervical cancer (HeLa, SiHa) [
      • Gupta P.
      • Kar S.
      • Kumar A.
      • et al.
      Pulsed laser assisted high-throughput intracellular delivery in hanging drop based three dimensional cancer spheroids.
      ,
      • Daum A.-.K.
      • Dittmann J.
      • Jansen L.
      • et al.
      ITIH5 shows tumor suppressive properties in cervical cancer cells grown as multicellular tumor spheroids.
      ], ovarian cancer (OVCAR3, ES-2, CSC from ovarian cancer, A2780) [
      • Rashidi M.R.W.
      • Mehta P.
      • Bregenzer M.
      • et al.
      Engineered 3D model of cancer stem cell enrichment and chemoresistance.
      ,
      • Salem M.
      • Shan Y.
      • Bernaudo S.
      • et al.
      miR-590-3p targets cyclin G2 and FOXO3 to promote ovarian cancer cell proliferation, invasion, and spheroid formation.
      ,
      • Raghavan S.
      • Mehta P.
      • Xie Y.
      • et al.
      Ovarian cancer stem cells and macrophages reciprocally interact through the WNT pathway to promote pro-tumoral and malignant phenotypes in 3D engineered microenvironments.
      ,
      • Bregenzer M.E.
      • Davis C.
      • Horst E.N.
      • et al.
      Physiologic patient derived 3D spheroids for anti-neoplastic drug screening to target cancer stem cells.
      ], pancreatic cancer (PANC-1, AsPc-1, BxPC-3, Capan-1 and MIA PiaCa2) [
      • Tehrani F.K.
      • Ranji N.
      • Kouhkan F.
      • et al.
      PANC-1 cancer stem-like cell death with silybin encapsulated in polymersomes and deregulation of stemness-related miRNAs and their potential targets.
      ,
      • Rahmani Z.
      • Safari F.
      Evaluating the in vitro therapeutic effects of human amniotic mesenchymal stromal cells on MiaPaca2 pancreatic cancer cells using 2D and 3D cell culture model.
      ,
      • Ware M.J.
      • Colbert K.
      • Keshishian V.
      • et al.
      Generation of homogenous three-dimensional pancreatic cancer cell spheroids using an improved hanging drop technique.
      ], and also head and neck carcinomas (SCC-25 and UPCI:SCC-154) [
      • Santi M.
      • Mapanao A.K.
      • Cappello V.
      • et al.
      Production of 3D tumor models of head and neck squamous cell carcinomas for nanotheranostics assessment.
      ] among others. This method has also been proven useful for growing cancer stem cells (CSCs), since the number of cells loaded on each droplet is very small, and CSCs represent a small percentage of the entire population of tumor cells [
      • Rashidi M.R.W.
      • Mehta P.
      • Bregenzer M.
      • et al.
      Engineered 3D model of cancer stem cell enrichment and chemoresistance.
      ,
      • Raghavan S.
      • Mehta P.
      • Xie Y.
      • et al.
      Ovarian cancer stem cells and macrophages reciprocally interact through the WNT pathway to promote pro-tumoral and malignant phenotypes in 3D engineered microenvironments.
      ,
      • Mehta P.
      • Novak C.
      • Raghavan S.
      • et al.
      Self-renewal and CSCs in vitro enrichment: growth as floating spheres.
      ,
      • Bregenzer M.
      • Horst E.
      • Mehta P.
      • et al.
      The role of the tumor microenvironment in CSC enrichment and chemoresistance: 3D Co-culture methods.
      ]. It is also possible to perform co-culture of different cell populations representative of the tumor environment, such as embryoid bodies and tumor spheroids, with the aid of microfluidic devices [
      • Rodoplu D.
      • Matahum J.S.
      • Hsu C.-.H.
      A microfluidic hanging drop-based spheroid co-culture platform for probing tumor angiogenesis.
      ]. HD spheroids can be applicated for high- throughput testing using 384-array plates as described in [
      • Mehta P.
      • Novak C.
      • Raghavan S.
      • et al.
      Self-renewal and CSCs in vitro enrichment: growth as floating spheres.
      ,
      • Bregenzer M.
      • Horst E.
      • Mehta P.
      • et al.
      The role of the tumor microenvironment in CSC enrichment and chemoresistance: 3D Co-culture methods.
      ]. While traditionally HD is a scaffold-free technique, recent methods have combined the HD protocol with the use of connective-based matrices [
      • Salo T.
      • Sutinen M.
      • Hoque Apu E.
      • et al.
      A novel human leiomyoma tissue derived matrix for cell culture studies.
      ,
      • Salo T.
      • Dourado M.R.
      • Sundquist E.
      • et al.
      Organotypic three-dimensional assays based on human leiomyoma–derived matrices.
      ] and hydrogels [
      • Su C.
      • Chuah Y.J.
      • Ong H.B.
      • et al.
      A facile and scalable hydrogel patterning method for microfluidic 3D cell culture and spheroid-in-gel culture array.
      ]. In this latter approach, hydrogels are patterned using “press-on” techniques to create culture niches in with confined spheroid-generating geometries and cells are seeded to create spheroid-in-gel cultures of breast cancer [
      • Su C.
      • Chuah Y.J.
      • Ong H.B.
      • et al.
      A facile and scalable hydrogel patterning method for microfluidic 3D cell culture and spheroid-in-gel culture array.
      ,
      • Krishnan M.A.
      • Chelvam V.
      Developing μSpherePlatform using a commercial hairbrush: an agarose 3d culture platform for deep-tissue imaging of prostate cancer.
      ,
      • Ganguli A.
      • Mostafa A.
      • Saavedra C.
      • et al.
      Three-dimensional microscale hanging drop arrays with geometric control for drug screening and live tissue imaging.
      ]. One advantage of these methods is that they are compatible with live-cell and other advanced imaging techniques [
      • Krishnan M.A.
      • Chelvam V.
      Developing μSpherePlatform using a commercial hairbrush: an agarose 3d culture platform for deep-tissue imaging of prostate cancer.
      ,
      • Ganguli A.
      • Mostafa A.
      • Saavedra C.
      • et al.
      Three-dimensional microscale hanging drop arrays with geometric control for drug screening and live tissue imaging.
      ]. However, medium exchange without disturbing cells can be challenging in these setups, and the use of commercial HD plates increases the cost of this technique [
      • Breslin S.
      • O'Driscoll L.
      Three-dimensional cell culture: the missing link in drug discovery.
      ]

      2.1.2 Overlay on agarose

      The liquid overlay technique (LOT) is probably the simplest way to generate spheroids and was first described by Carlsson and Yuhas in 1984 [
      • Carlsson J.
      • Yuhas J.
      Liquid-overlay culture of cellular spheroids.
      ]. In this method, a defined number of cells (ranging from 1000–20,000 ) were cultured in a liquid suspension on a non-adhesive surface, originally obtained by coating regular, flat-bottomed wells with a thin layer of agarose (1%). This prevents cell attachment to the surface of the well and drives cell aggregation. Other materials, such as scaffolds produced with poorly adhesive biomaterials such as polymethylsiloxane may be used [
      • Carvalho M.P.
      • Costa E.C.
      • Miguel S.P.
      • et al.
      Tumor spheroid assembly on hyaluronic acid-based structures: a review.
      ]. Recently, hyaluronic acid (HA) has been proposed as an alternative coating material, since it is a non-adhesive polymer that has the ability of, unlike other materials, regulating cancer cell behavior via cell-HA signaling [
      • Carvalho M.P.
      • Costa E.C.
      • Miguel S.P.
      • et al.
      Tumor spheroid assembly on hyaluronic acid-based structures: a review.
      ,
      • Chauzy C.
      • Delpech B.
      • Olivier A.
      • et al.
      Establishment and characterisation of a human glioma cell line.
      ,
      • Stark Y.
      • Bruns S.
      • Stahl F.
      • et al.
      A study on polysialic acid as a biomaterial for cell culture applications.
      ,
      • Carvalho M.P.
      • Costa E.C.
      • Correia I.J.
      Assembly of breast cancer heterotypic spheroids on hyaluronic acid coated surfaces.
      ]. Notably, in a study by Carvalho et al., by altering the HA concentration as well as the number of cells seeded in each well, the size, shape, and number of spheroids were controlled, and heterotypic spheroids with a co-culture of MCF-7 breast cancer cell line and normal human dermal fibroblasts (NHDF) were possible, simulating the interactions between cancer cells and cancer-associated fibroblasts [
      • Carvalho M.P.
      • Costa E.C.
      • Correia I.J.
      Assembly of breast cancer heterotypic spheroids on hyaluronic acid coated surfaces.
      ]. Several other cell lines and primary cells of breast cancer [
      • Carvalho M.P.
      • Costa E.C.
      • Correia I.J.
      Assembly of breast cancer heterotypic spheroids on hyaluronic acid coated surfaces.
      ,
      • Yakavets I.
      • Francois A.
      • Benoit A.
      • et al.
      Advanced co-culture 3D breast cancer model for investigation of fibrosis induced by external stimuli: optimization study.
      ], prostatic cancer, cervical cancer [
      • Sims L.B.
      • Huss M.K.
      • Frieboes H.B.
      • et al.
      Distribution of PLGA-modified nanoparticles in 3D cell culture models of hypo-vascularized tumor tissue.
      ], melanoma [
      • Baciu D.D.
      • Dumitrașcu A.M.
      • Vasile V.
      • et al.
      Generation of a 3D melanoma model and visualization of doxorubicin uptake by fluorescence imaging.
      ,
      • Saleh N.A.
      • Rode M.P.
      • Sierra J.A.
      • et al.
      Three-dimensional multicellular cell culture for anti-melanoma drug screening: focus on tumor microenvironment.
      ] and head and neck carcinomas have been demonstrated to form spheroids with this technique.
      Under optimal parameterization, spheroids obtained by LOT on 1–2% agarose may have homogeneous sizes, morphologies and stratification. Horizontal stirring between 150 and 200 rpm during the first six days of culture seemed to improve cell aggregation [
      • Costa E.C.
      • Gaspar V.M.
      • Coutinho P.
      • et al.
      Optimization of liquid overlay technique to formulate heterogenic 3D co-cultures models.
      ]. One great advantage of this method is the cost (it is one of the least expensive methods for spheroid generation) and simplicity [
      • Das V.
      • Fürst T.
      • Gurská S.
      • et al.
      Evaporation-reducing culture condition increases the reproducibility of multicellular spheroid formation in microtiter plates.
      ]. Some disadvantages of LOT on agarose are its rather limited adaptation to high-throughput screening, for example, the challenges in obtaining uniform coating of microtiter plates with agarose and the variability in spheroid formation across wells [
      • Yakavets I.
      • Francois A.
      • Benoit A.
      • et al.
      Advanced co-culture 3D breast cancer model for investigation of fibrosis induced by external stimuli: optimization study.
      ,
      • Saleh N.A.
      • Rode M.P.
      • Sierra J.A.
      • et al.
      Three-dimensional multicellular cell culture for anti-melanoma drug screening: focus on tumor microenvironment.
      ]. Another limitation is the fact that conventional microplates are prone to edge defects that may lead to evaporation of plate contents, particularly in the external wells, compromising drug testing [
      • Das V.
      • Fürst T.
      • Gurská S.
      • et al.
      Evaporation-reducing culture condition increases the reproducibility of multicellular spheroid formation in microtiter plates.
      ].

      2.1.3 Ultra-low attachment plates or non-adhesive culture plates (ULA)

      The ultra-low attachment (ULA) plate method for generating spheroids is also a scaffold-free model that is based on the use of uncoated plates or plates coated with a hydrophilic polymer with a round or V-shaped bottom that enables forced floating and spheroid self-assembly. The principle is similar to that behind the LOT, and for that reason, the ULA may be considered a type of LOT. Spheroids generated using ULA are normally homogeneous and uniformly sized and may be generated with 500–20,000 cells per well. After 24 h , spheroid formation began, and visible aggregates were detected after a few days. Apart from the controlled size and shape of the spheroids, which is an advantage compared to other methods, high-throughput research and drug screening are enabled because ULA multi-well plates and automation are compatible with various testing platforms [
      • Ma R.
      • Mandell J.
      • Lu F.
      • et al.
      Do patient-derived spheroid culture models have relevance in chondrosarcoma research?.
      ]. In addition, spheroid cultures on ULA can be used for tumor cell migration and invasion assays and immunohistochemical staining [
      • Close D.A.
      • Camarco D.P.
      • Shan F.
      • et al.
      The generation of three-dimensional head and neck cancer models for drug discovery in 384-well ultra-low attachment microplates.
      ].
      Comparative studies on the efficacy and suitability of HD and ULA methods for generating spheroids for chemoresistance assays have demonstrated that, while spheroid circularity is similar between methods, the size of the ULA spheroids is normally larger, suggesting that ULA may generate lower adhesive forces between cells in the spheroid, which may pose a limitation for some types of studies that require organoid transfer. Although the specific cells and cancer type to be modeled need to be considered, ULA has been consistently demonstrated to be more reliable and predictable than the HD method and therefore can be considered more adequate for generating spheroids for cytotoxicity assays [
      • Raghavan S.
      • Mehta P.
      • Horst E.N.
      • et al.
      Comparative analysis of tumor spheroid generation techniques for differential in vitro drug toxicity.
      ].

      2.1.4 Spinner flasks and rotary cell cultures

      Agitation-based methods are based on suspension cell culture systems that use a bioreactor to generate a constant dynamic fluid flow that results from the horizontal or vertical rotation of the vessel. This enables constant nutrient input and removal of waste products generated by long cultures while assuring an optimal balance with the negative effects of shear stress on cells. The continuous motion also ensures that the cells do not adhere to the container walls, but rather form cell-cell adhesions [
      • Breslin S.
      • O'Driscoll L.
      Three-dimensional cell culture: the missing link in drug discovery.
      ]. Rotating Cell Culture System™ (RCCS) developed by NASA and commercialized by Synthecon® Inc., spinner flasks are examples of such bioreactors that are also capable of creating microgravity conditions, which are potentially involved in mechanisms controlling cancer growth and function [
      • Prasanth D.
      • Suresh S.
      • Prathivadhi-Bhayankaram S.
      • et al.
      Microgravity modulates effects of chemotherapeutic drugs on cancer cell migration.
      ,
      • Belloni D.
      • Heltai S.
      • Ponzoni M.
      • et al.
      Modeling multiple myeloma-bone marrow interactions and response to drugs in a 3D surrogate microenvironment.
      ]. Spinner-flask bioreactors include a cell container holding the cell suspension and a stirring element that creates a constant motion of the suspension. In RCCS, the culture vessel itself rotates and creates a low shear force in the cell culture.
      Agitation-based approaches may be considered when special conditions, such as normoxia or hypoxia, are to be simulated, as well as specific drug assays, including in vitro pharmacokinetic studies [
      • Ferrarini M.
      • Steimberg N.
      • Boniotti J.
      • et al.
      3D-dynamic culture models of multiple myeloma.
      ]. The advantages of these techniques are the simplicity of the method, enabling the large-scale production of spheroids and long-term cultures [
      • Barrila J.
      • Radtke A.L.
      • Crabbé A.
      • et al.
      Organotypic 3D cell culture models: using the rotating wall vessel to study host–pathogen interactions.
      ]. RCCS successfully integrates cellular colocalization, 3D stromal/epithelial/matrix interactions, and low shear forces, providing a quiescent environment for 3D spheroid cell culture with adequate mixing for mass transport [
      • Prasanth D.
      • Suresh S.
      • Prathivadhi-Bhayankaram S.
      • et al.
      Microgravity modulates effects of chemotherapeutic drugs on cancer cell migration.
      ]. However, spheroids produced by bioreactors are heterogeneous in shape, which means that in experiments where the size of spheroids needs to be controlled, manual selection of the spheroids generated and replating onto a culture plate is required [
      • Lin R.Z.
      • Chang H.Y.
      Recent advances in three-dimensional multicellular spheroid culture for biomedical research.
      ]. Therefore, apart from requiring specialized and expensive equipment, this may be a time-consuming method because of the additional steps required if spheroid size and number control are required [
      • Breslin S.
      • O'Driscoll L.
      Three-dimensional cell culture: the missing link in drug discovery.
      ,
      • Chaicharoenaudomrung N.
      • Kunhorm P.
      • Noisa P.
      Three-dimensional cell culture systems as an in vitro platform for cancer and stem cell modeling.
      ].

      2.2 Organoids

      An organoid is a three-dimensional (3D) culture that has organ-like properties and must be able to mimic organ architecture to reproduce its functions [
      • Aberle M.R.
      • Burkhart R.A.
      • Tiriac H.
      • et al.
      Patient-derived organoid models help define personalized management of gastrointestinal cancer.
      ,
      • Cheng D.
      • Tuveson D.
      Kras in organoids.
      ,
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ,
      • Driehuis E.
      • Kretzschmar K.
      • Clevers H.
      Establishment of patient-derived cancer organoids for drug-screening applications.
      ]. Unlike spheroid cultures, in which the 3D culture is derived from monolayer cell lines, organoids describe 3D cultures established from tissue fragments [
      • Lin R.Z.
      • Chang H.Y.
      Recent advances in three-dimensional multicellular spheroid culture for biomedical research.
      ,
      • Aberle M.R.
      • Burkhart R.A.
      • Tiriac H.
      • et al.
      Patient-derived organoid models help define personalized management of gastrointestinal cancer.
      ]. In this sense, they include several cell types as seen in vivo, namely by culturing stem cells or cancerous tissue in matrices supplemented with specific molecules that are representative of native tissue [
      • Chitturi Suryaprakash R.T.
      • Kujan O.
      • Shearston K.
      • et al.
      Three-dimensional cell culture models to investigate oral carcinogenesis: a scoping review.
      ]. This allows organoids to copy the genotype and phenotype of their corresponding tissues in vivo. Currently, several natural and synthetic materials are used for matrix formulation. The most commonly used matrices are based on collagen or Matrigel™ [
      • Cheng D.
      • Tuveson D.
      Kras in organoids.
      ,
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ,
      • Chitturi Suryaprakash R.T.
      • Kujan O.
      • Shearston K.
      • et al.
      Three-dimensional cell culture models to investigate oral carcinogenesis: a scoping review.
      ]. However, MatrigelTM has limitations, such as batch-to-batch variation and the nature of animal tumor-derived raw material composed of unidentified components [
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ]. Decellularized tissue matrices have been suggested as an alternative to conventional matrices because of their ability to better simulate the extracellular matrix (ECM). Another alternative approach is the use of hydrogels, for example, poly (ethylene glycol) . Cancer organoid modeling using a well-defined biomaterial can provide more typical disease phenotypes and pathophysiology [
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ].
      Several approaches to perform organoid-like 3D cell culture have been described in the literature, including patient-derived organoids, engineered organoids, and organ-on-a-chip [
      • Aberle M.R.
      • Burkhart R.A.
      • Tiriac H.
      • et al.
      Patient-derived organoid models help define personalized management of gastrointestinal cancer.
      ,
      • Wadosky K.M.
      • Wang Y.
      • Zhang X.
      • et al.
      Generation of tumor organoids from genetically engineered mouse models of prostate cancer.
      ]. These techniques are described and discussed below.

      2.2.1 Patient derived cancer organoid

      Patient-derived cancer organoids (PDCO) is widely used to culture patient-specific cells in vitro [
      • Driehuis E.
      • Kretzschmar K.
      • Clevers H.
      Establishment of patient-derived cancer organoids for drug-screening applications.
      ]. PDCOs demonstrate an individual pathological environment and grow well in a 3D matrix. These can be maintained long-term and cryopreserved [
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ,
      • Bleijs M.
      • van de Wetering M.
      • Clevers H.
      • et al.
      Xenograft and organoid model systems in cancer research.
      ], thus making this model system useful for effective drug testing and ultimately for individualized drug development [
      • Kim S.K.
      • Kim Y.H.
      • Park S.
      • et al.
      Organoid engineering with microfluidics and biomaterials for liver, lung disease, and cancer modeling.
      ]. These models offer the possibility of patient-specific high-throughput drug screening to select the most effective therapeutic approach in personalized medicine. Additionally, PDCOs are a good option for investigating the properties and cellular heterogeneity of tumors because their main advantage is to reproduce the genetic and phenotypic heterogeneity found in the original tumors. So far, the majority of PDCOs described in literature are derived from epithelial cancers [
      • Bleijs M.
      • van de Wetering M.
      • Clevers H.
      • et al.
      Xenograft and organoid model systems in cancer research.
      ]. The main disadvantage of these models is the time required to establish and test a customized tumor model [
      • Aberle M.R.
      • Burkhart R.A.
      • Tiriac H.
      • et al.
      Patient-derived organoid models help define personalized management of gastrointestinal cancer.
      ]. Another limitation is the lack of an immune-competent environment that can be overcome by co-culturing with T lymphocytes [
      • Bleijs M.
      • van de Wetering M.
      • Clevers H.
      • et al.
      Xenograft and organoid model systems in cancer research.
      ].

      2.2.2 Engineered cancer organoid

      Conventional organoid culture mainly focuses on producing multicellular structures with either a single or multiple cell types. This structure is simple, disorganized, and limited in terms of tissue-level features [
      • Luo Z.
      • Zhou X.
      • Mandal K.
      • et al.
      Reconstructing the tumor architecture into organoids.
      ]. Engineering approach includes genetic manipulation of organoids to lead malignant transformation [
      • Porter R.J.
      • Murray G.I.
      • McLean M.H.
      Current concepts in tumour-derived organoids.
      ]. This technique is used with organoid technology to overcome the disadvantages of conventional organoid culture, namely costs, and is very time consuming [
      • Zhao H.
      • Yan C.
      • Hu Y.
      • et al.
      Differentiated cancer cell-originated lactate promotes the self-renewal of cancer stem cells in patient-derived colorectal cancer organoids.
      ]. Similar to PDCO, it also has a limitation: the lack of an immune system that can be solved through transplantation of hematopoietic stem cells [
      • Bleijs M.
      • van de Wetering M.
      • Clevers H.
      • et al.
      Xenograft and organoid model systems in cancer research.
      ]. Although PDCO is well described in the literature, few reports on engineered organoid cancer models are available.

      2.2.3 Organ-on-a-chip

      The advancements in microfluidic technology, tissue engineering, and 3D printing have facilitated the development of organ-on-a-chip models for cancer research [
      • Koyilot M.C.
      • Natarajan P.
      • Hunt C.R.
      • et al.
      Breakthroughs and applications of organ-on-a-chip technology.
      ]. These models have emerged as powerful tools for studying human physiology and pathology at molecular, cellular, and tissue levels. To fabricate these models, 3D channels and chambers are patterned using flexible materials such as polymers or bioinks through soft lithography or 3D printing technologies [
      • Del Piccolo N.
      • Shirure V.S.
      • Bi Y.
      • et al.
      Tumor-on-chip modeling of organ-specific cancer and metastasis.
      ]. These channels and chambers are then filled with fluids or hydrogels containing cells to mimic the 3D structure and forces of human tissue, with control over important physicochemical factors such as oxygen tension, interstitial pressure, and chemical gradients [
      • Koyilot M.C.
      • Natarajan P.
      • Hunt C.R.
      • et al.
      Breakthroughs and applications of organ-on-a-chip technology.
      ]. Several cancer-on-a-chip models have been developed for different primary and metastatic tumor types, including liver, lung, breast, prostate, colorectal, skin, metastatic liver, lung, bone, and brain cancers [
      • Del Piccolo N.
      • Shirure V.S.
      • Bi Y.
      • et al.
      Tumor-on-chip modeling of organ-specific cancer and metastasis.
      ]. These cancer-on-a-chip models are capable of simulating key physiological, biophysical, and biochemical hallmarks observed in vivo, making them suitable for drug and immunotherapy screening under dynamic flow conditions [
      • Monteiro M.V.
      • Zhang Y.S.
      • Gaspar V.M.
      • et al.
      3D-bioprinted cancer-on-a-chip: level-up organotypic in vitro models.
      ].
      Recent advances have focused on including lymphoid components in these models, thus enabling the study of dynamic mechanisms of tumor development, invasion, and resistance in interaction with surrounding tissues and the lymphatic system, including metastasis, hypoxia-state, and onco-immuno modeling in a cancer-type-specific way [
      • Monteiro M.V.
      • Zhang Y.S.
      • Gaspar V.M.
      • et al.
      3D-bioprinted cancer-on-a-chip: level-up organotypic in vitro models.
      ,
      • Liu X.
      • Su Q.
      • Zhang X.
      • et al.
      Recent advances of organ-on-a-chip in cancer modeling research.
      ,
      • Sun W.
      • Luo Z.
      • Lee J.
      • et al.
      Organ-on-a-chip for cancer and immune organs modeling.
      ]. These immune-active platforms, although still in their early stages, have the potential to enable both drug and immunotherapy screening under dynamic flow, thus providing more meaningful results, with exciting perspectives and advances expected in the near future [
      • Monteiro M.V.
      • Zhang Y.S.
      • Gaspar V.M.
      • et al.
      3D-bioprinted cancer-on-a-chip: level-up organotypic in vitro models.
      ,
      • Liu X.
      • Su Q.
      • Zhang X.
      • et al.
      Recent advances of organ-on-a-chip in cancer modeling research.
      ].
      The current limitations of these models include the lack of standardization, technical challenges in production, and limitations in reproducibility and throughput. Cancer-on-a-chip uses mainly immortalized cell lines with limitations for in vivo extrapolation and unrealistic cell homogeneity. Future research should address these limitations by incorporating autogenous cells and relevant cell types in the tumor microenvironment, such as endothelial cells, cancer-associated fibroblasts, tumor cells, and organ/specific cell types [
      • Del Piccolo N.
      • Shirure V.S.
      • Bi Y.
      • et al.
      Tumor-on-chip modeling of organ-specific cancer and metastasis.
      ].

      2.3 Scaffold-Based 3D tumor models

      Advances in biomaterial research in the area of scaffold development have been primed to meet the laboratory and clinical needs of numerous biomedical applications, including the rapidly growing area of engineering cancer microenvironments [
      • Hutmacher D.W.
      Biomaterials offer cancer research the third dimension.
      ,
      • Thakuri P.S.
      • Liu C.
      • Luker G.D.
      • et al.
      Biomaterials-Based Approaches to Tumor Spheroid and Organoid Modeling.
      ]. Scaffold-based cancer models provide an appropriate microenvironment where cells can reside and proliferate; moreover, they facilitate cell-cell and cell-ECM interactions in the native tumor microenvironment [
      • Rijal G.
      • Li W.
      3D scaffolds in breast cancer research.
      ,
      • Miserocchi G.
      • Cocchi C.
      • De Vita A.
      • et al.
      Three-dimensional collagen-based scaffold model to study the microenvironment and drug-resistance mechanisms of oropharyngeal squamous cell carcinomas.
      ]. These 3D scaffolds are produced from a wide range of materials and possess tunable porosities, permeabilities, surface chemistries, and mechanical characteristics [
      • Chaicharoenaudomrung N.
      • Kunhorm P.
      • Noisa P.
      Three-dimensional cell culture systems as an in vitro platform for cancer and stem cell modeling.
      ]. In this section, we present scaffold-based 3D models fabricated using natural and synthetic assisted in replicating the tumor microenvironment and facilitating the testing of new cancer therapies (Table 2).
      Table 2Scaffold-based 3D culture system for cancer cells.
      Type of scaffoldsCell typeCell lineOutcomeReference
      NaturalCollagenBreast cancerMCF-7Increase pro-angiogenic growth factors and matrix metalloproteinase transcription factors.
      • Chen Y.-.S.
      • Huang W.-.L.
      • Chang S.-.H.
      • et al.
      Enhanced filopodium formation and stem-like phenotypes in a novel metastatic head and neck cancer cell model.
      ,
      • Chen L.
      • Xiao Z.
      • Meng Y.
      • et al.
      The enhancement of cancer stem cell properties of MCF-7 cells in 3D collagen scaffolds for modeling of cancer and anti-cancer drugs.
      ,
      • Xu F.
      • Celli J.
      • Rizvi I.
      • et al.
      A three-dimensional in vitro ovarian cancer coculture model using a high-throughput cell patterning platform.
      OV-NC, OV-206
      Ovarian cancer
      Cells increase stem cell phenotype.
      Increase chemotherapy resistance.
      ChitosanBreast cancerMCF-7Supports cancer cell growth into clumps vertically along the surface of the scaffold.
      • Dhiman H.K.
      • Ray A.R.
      • Panda A.K.
      Characterization and evaluation of chitosan matrix for in vitro growth of MCF-7 breast cancer cell lines.
      ,
      • Wang K.
      • Kievit F.M.
      • Florczyk S.J.
      • et al.
      3D porous chitosan–alginate scaffolds as an in vitro model for evaluating nanoparticle-mediated tumor targeting and gene delivery to prostate cancer.
      ,
      • Han H.W.
      • Hsu S.H.
      Chitosan-hyaluronan based 3D co-culture platform for studying the crosstalk of lung cancer cells and mesenchymal stem cells.
      ,
      • Leung M.
      • Kievit F.M.
      • Florczyk S.J.
      • et al.
      Chitosan-alginate scaffold culture system for hepatocellular carcinoma increases malignancy and drug resistance.
      Prostate cancerTRAMP-C2
      Supports cancer cell growth into spheroids, increase EMT and ECM gene markers compared to the 2d conditions.
      A549
      Lung cancer
      HepG2
      Increase stemness and EMT gene markers, cell mobility.
      Liver cancerIncrease of angiogenic factors expression and ECM deposition.
      Increase chemotherapy resistance.
      AlginateHead and neck squamous cellTca 8113Increase proliferation, enhance EMT, enhance stemness markers.[
      • Liu C.
      • Liu Y.
      • Xu X.-x.
      • et al.
      Potential effect of matrix stiffness on the enrichment of tumor initiating cells under three-dimensional culture conditions.
      ,
      • Rebelo S.P.
      • Pinto C.
      • Martins T.R.
      • et al.
      3D-3-culture: a tool to unveil macrophage plasticity in the tumour microenvironment.
      ]
      NCI-H157
      Increase ECM formation, upregulation of EMT markers and cancer associated fibroblasts (CAF).
      Carcinoma Lung cancer
      GelatinLung cancerWa-hTEMT markers, enhance invasion phenotype, and cancer associated fibroblasts (CAF).
      • Nii T.
      • Makino K.
      • Tabata Y.
      A cancer invasion model combined with cancer-associated fibroblasts aggregates incorporating gelatin hydrogel microspheres containing a p53 inhibitor.
      SilkBreast cancer and fibroblas co-cultureEMT6, and NIH3T3Increase ECM formation, activation of monocytes into TAM-associated phenotype, increase drug resistance.[
      • Dondajewska E.
      • Juzwa W.
      • Mackiewicz A.
      • et al.
      Heterotypic breast cancer model based on a silk fibroin scaffold to study the tumor microenvironment.
      ,
      • Bulysheva A.A.
      • Bowlin G.L.
      • Petrova S.P.
      • et al.
      Enhanced chemoresistance of squamous carcinoma cells grown in 3D cryogenic electrospun scaffolds.
      ]
      HN12
      Squamous cell carcinoma
      Increase ECM formation, migration, upregulation of EMT markers. Increase chemotherapy resistance.
      SyntheticPoly (lactic acid) (PLA)Breast cancerTNBC cell line MDA-MB231Higher rate of proliferation compared to the 2D conditions.
      • Polonio-Alcalá E.
      • Rabionet M.
      • Gallardo X.
      • et al.
      PLA electrospun scaffolds for three-dimensional triple-negative breast cancer cell culture.
      Cells maintained an epithelial
      phenotype rather than acquiring a mesenchymal phenotype.
      Cells had reduced stem cell phenotype.
      Poly (ϵ-caprolactone) (PCL)Breast cancerMCF-10ACell penetration into fiber, spread patter and elongated structures.
      • Rijal G.
      • Li W.
      3D scaffolds in breast cancer research.
      MCF7 and JIMT-1
      Spheroid growing patter.
      HCC1954Increase cancer stem cell population.
      HybridPoly Lactic-co-Gycolic Acid (PLGA) with GelMA hydrogelGastric cancerMKN74Enhance EMT compared to 2D conditions, or PLGA and GelMA alone.
      • Pal M.
      • Chen H.
      • Lee B.H.
      • et al.
      Epithelial-mesenchymal transition of cancer cells using bioengineered hybrid scaffold composed of hydrogel/3D-fibrous framework.
      Cells increase stem cell phenotype.
      PLGA and collagenLung cancerA549Increase cell attachment, proliferation, chemotherapy resistance.
      • Dhamecha D.
      • Le D.
      • Movsas R.
      • et al.
      Porous polymeric microspheres with controllable pore diameters for tissue engineered lung tumor model development.
      PLGA and nano hydroxyapatiteBreast cancerMCF-7Increased cell viability and grown, and EMT markers.
      • Luo H.
      • Zhang Y.
      • Gan D.
      • et al.
      Incorporation of hydroxyapatite into nanofibrous PLGA scaffold towards improved breast cancer cell behavior.
      Chitosan-alginate fiber scaffoldsBreast cell co-culture with fibroblasts and tumor stromal T cell231Increase migration through mesenchymal amoeboid transition.[
      • Leung M.
      • Kievit F.M.
      • Florczyk S.J.
      • et al.
      Chitosan-alginate scaffold culture system for hepatocellular carcinoma increases malignancy and drug resistance.
      ,
      • Luo H.
      • Zhang Y.
      • Gan D.
      • et al.
      Incorporation of hydroxyapatite into nanofibrous PLGA scaffold towards improved breast cancer cell behavior.
      ]
      HepG2
      Increase of angiogenic factors expression and ECM deposition. Increase chemotherapy resistance.
      Liver cancer
      EMT, epithelial mesenchymal transition; ECM, extracellular matrix; 3D three dimension; 2D two dimension; CAF, cancer associated fibroblasts; TAM, tumor associated macrophages. American Type Culture Collection cell lines: MCF-7(CLR-3535), NIH/3T3 (CRL-1658), TNBC (TPC-1003), MDA-MB-231(HTB-26), MCF-10A (CRL-10,317), HCC1954 (CRL-2338), A549 (CRM-CCL-185), MDA-MB-231 (CRM-HTB-26), Hep G2 [HEPG2] (HB-8065); AcceGen Biotech cell line: MKN74 (RRID:CVCL_2791);Wayne State University cell line: WSU-HN12 (RRID:CVCL_5518); LINCS Project Library of Integrated Network-based Cellular Signatures cell line: JIMT-1 (ACC589).

      2.3.1 Natural scaffold

      Depending on the application, scaffolding materials can be sourced from natural substances or biological sources, such as proteins commonly found in the ECM in vivo [
      • Rijal G.
      • Li W.
      3D scaffolds in breast cancer research.
      ,
      • Monteiro M.V.
      • Gaspar V.M.
      • Ferreira L.P.
      • et al.
      Hydrogel 3D in vitro tumor models for screening cell aggregation mediated drug response.
      ,
      • Bupphathong S.
      • Quiroz C.
      • Huang W.
      • et al.
      Gelatin Methacrylate hydrogel for tissue engineering applications—a review on material modifications.
      ]. These include, but are not limited to, collagen, gelatin, silk, chitosan, and alginate [
      • Chaicharoenaudomrung N.
      • Kunhorm P.
      • Noisa P.
      Three-dimensional cell culture systems as an in vitro platform for cancer and stem cell modeling.
      ,
      • Miserocchi G.
      • Cocchi C.
      • De Vita A.
      • et al.
      Three-dimensional collagen-based scaffold model to study the microenvironment and drug-resistance mechanisms of oropharyngeal squamous cell carcinomas.
      ]. In addition, biomaterials such as Matrigel™ and gelatin methacrylate (GelMA) have been explored to formulate 3D in vitro platforms, mainly in the form of hydrogels, because they can recreate ECM cues better than their free-scaffold counterparts [
      • Monteiro M.V.
      • Gaspar V.M.
      • Ferreira L.P.
      • et al.
      Hydrogel 3D in vitro tumor models for screening cell aggregation mediated drug response.
      ]. An adequate material selection is crucial to the scaffold fabrication and must be compatible with the production technique to function effectively with in vitro models [
      • Mata A.
      • Geng Y.
      • Henrikson K.J.
      • et al.
      Bone regeneration mediated by biomimetic mineralization of a nanofiber matrix.
      ]. Natural polymeric scaffolds have low immunogenic properties and are popular options for in vitro culture models. However, their limitations include poor biomechanical properties, lot-to-lot variability, and difficult control of degradation rate and sterilization.
      In addition, scaffold pore size and pore interconnectivity are essential features to consider in scaffold design because they determine the amount of oxygen and nutrients distributed over the scaffold [
      • Lv D.
      • Hu Z.
      • Lu L.
      • et al.
      Three‑dimensional cell culture: a powerful tool in tumor research and drug discovery.
      ]. Hence, different fabrication techniques can produce scaffolds with different porosities, pore sizes, shapes, and features. For example, freeze-drying method is an effective technique for fabricating scaffolds with a porosity of more than 90% and a pore size between 20 to 200 µm [
      • Liu X.
      • Ma P.X.
      Polymeric scaffolds for bone tissue engineering.
      ]. Miserocchi et.al [
      • Miserocchi G.
      • Cocchi C.
      • De Vita A.
      • et al.
      Three-dimensional collagen-based scaffold model to study the microenvironment and drug-resistance mechanisms of oropharyngeal squamous cell carcinomas.
      ] used freeze-drying to produce collagen hydrogels with a patient-derived primary culture of squamous cell carcinoma-papilloma virus-positive tumors, confirming the ability of collagen-based scaffolds to induce drug resistance. The authors pointed out that primary cultures conserved parts of stromal populations and different subclones of patient tumor tissue. The model could analyze drug resistance to standard chemotherapeutic agents used to treat oral cancer (5-fluorouracil and gemcitabine), corroborating an overexpression of epithelial-mesenchymal transition (EMT)-related genes and enhanced in vitro migration ability of the tumor. Although the former model is a step closer to personalized medicine, surgical samples are often difficult to obtain by laboratories and their management is complex [
      • Miserocchi G.
      • Cocchi C.
      • De Vita A.
      • et al.
      Three-dimensional collagen-based scaffold model to study the microenvironment and drug-resistance mechanisms of oropharyngeal squamous cell carcinomas.
      ].
      Moreover, Bulysheva et.al [
      • Bulysheva A.A.
      • Bowlin G.L.
      • Petrova S.P.
      • et al.
      Enhanced chemoresistance of squamous carcinoma cells grown in 3D cryogenic electrospun scaffolds.
      ] cultured WSU-HN12 cells, a metastatic squamous cell carcinoma cell line, on cryogenic electrospun silk scaffolds, evaluated the sensitivity of paclitaxel and compared it with 2D culture conditions. Their results indicated that HN12 in 3D culture conditions were more resistant to the chemotherapeutic agent and showed similar features to in vivo conditions, including drug resistance and high Ki-67 expression. Head and neck cancer organoids established by modifying the CTOS method can be used to predict in vivo drug sensitivity by combining an epithelial cell sheet, MatrigelTM, and primary culture from head and neck cancer patients. The constructs were treated with cisplatin and docetaxel for one week. The 3D cultures showed increased drug resistance, and the results corresponded those of individual patient donors with recurrent head and neck cancer [
      • Tanaka N.
      • Osman A.A.
      • Takahashi Y.
      • et al.
      Head and neck cancer organoids established by modification of the CTOS method can be used to predict in vivo drug sensitivity.
      ].
      Hydrogels can capture vast quantities and retain a 3D structure; they can be easily analyzed to assess cell viability, proliferation, tumor formation, or onset of hypoxia [
      • Monteiro M.V.
      • Gaspar V.M.
      • Ferreira L.P.
      • et al.
      Hydrogel 3D in vitro tumor models for screening cell aggregation mediated drug response.
      ]. Although hydrogel platforms can encapsulate cells and imitate native ECM, the arrangement of cancer cell upon incorporation is a crucial parameter to be evaluated [
      • Monteiro M.V.
      • Zhang Y.S.
      • Gaspar V.M.
      • et al.
      3D-bioprinted cancer-on-a-chip: level-up organotypic in vitro models.
      ]. For example, differential and random cellular arrangements in a hydrogel matrix may impact cell-cell adhesion, physiology, and drug resistance, consequently influencing therapeutic bioactivity [
      • Unnikrishnan K.
      • Thomas L.V.
      • Ram Kumar R.M.
      Advancement of scaffold-based 3D cellular models in cancer tissue engineering: an update.
      ,
      • Bassi G.
      • Panseri S.
      • Dozio S.M.
      • et al.
      Scaffold-based 3D cellular models mimicking the heterogeneity of osteosarcoma stem cell niche.
      ]. In addition, cell-laden hydrogel models may present limitations in evaluating drug resistance and anti-metastatic functions [
      • Unnikrishnan K.
      • Thomas L.V.
      • Ram Kumar R.M.
      Advancement of scaffold-based 3D cellular models in cancer tissue engineering: an update.
      ]. Recently, and to address this issue, Monteiro and co-workers [
      • Monteiro M.V.
      • Gaspar V.M.
      • Ferreira L.P.
      • et al.
      Hydrogel 3D in vitro tumor models for screening cell aggregation mediated drug response.
      ] evaluated the in vitro maturation of MG-63 osteosarcoma spheroids and cell lines in GelMA and Matrigel™ hydrogels. Their results revealed that spheroids embedded in hydrogels exhibited an enhanced invasion phenotype and showed higher sensitivity to lorlatinib, a kinase inhibitor, when compared with their cell-laden counterparts.
      In addition, physical and mechanical changes in the ECM, such as stiffness, are commonly overlooked by 2D culture models, which are heterogenic in tumors. For example, correlative maps obtained from breast tumor biopsies show that stiffness varies from 2 kPa in the core to 20 kPa in the periphery [
      • Liu C.
      • Li M.
      • Dong Z.-.X.
      • et al.
      Heterogeneous microenvironmental stiffness regulates pro-metastatic functions of breast cancer cells.
      ]. Also, tumor tissues are stiffer than their normal counterparts, for example., normal liver tissue has a stiffness of approximately 1.5–5 kPa, while fibrotic or tumoral tissue show 14–69 kPa stiffness [
      • Leal-Egaña A.
      • Fritsch A.
      • Heidebrecht F.
      • et al.
      Tuning liver stiffness against tumours: an in vitro study using entrapped cells in tumour-like microcapsules.
      ].
      Further improvements in 3D natural scaffolds have been achieved, usually by blending additional connective tissue components or biocompatibility compounds, especially growth factors, which could optimize scaffolding conditions and overcome the mechanical and biological limitations of the scaffold [
      • Rijal G.
      • Li W.
      3D scaffolds in breast cancer research.
      ]. However, typical problems are associated with this type of scaffold, including the availability of materials that match the tissue of interest, tedious procedures, unwanted remnant proteins, and confusing signaling events [
      • Rijal G.
      • Li W.
      3D scaffolds in breast cancer research.
      ]. The former is also true for synthetic polymeric scaffolds.

      2.3.2 Synthetic scaffolds

      Synthetic polymers are a popular choice for the fabrication of 3D scaffolds owing to their high biocompatibility, degradability, and resorption. Also, they can be used with standard processing techniques, such as melt electrospinning or air-jet spinning. Electrospinning techniques for highly porous 3D scaffold fabrication involve the use of high voltage or gas to create charges on a polymer solution ejected at a specified flow rate using a syringe pump [
      • Bello J.S.
      • Cruz-Maya I.
      • González-Alva P.
      • et al.
      Electro-and nonelectro-assisted spinning technologies for in vitro and in vivo models.
      ]. Once the electrostatic forces exceed the surface tension of the fluid, the solution is pulled towards a grounded collector, and fiber mats are formed in the process [
      • Amiryaghoubi N.
      • Fathi M.
      • Pesyan N.N.
      • et al.
      Bioactive polymeric scaffolds for osteogenic repair and bone regenerative medicine.
      ].
      Synthetic polymers can mimic the structural properties of the ECM; however, they fail to provide the biochemical signals needed for cell-ECM communication [
      • Unnikrishnan K.
      • Thomas L.V.
      • Ram Kumar R.M.
      Advancement of scaffold-based 3D cellular models in cancer tissue engineering: an update.
      ]. Also, most polymers have mechanical limitations, and they are often combined with inorganic materials that can enhance their properties, such as bioglasses or calcium phosphate [
      • Almeida C.R.
      • Serra T.
      • Oliveira M.I.
      • et al.
      Impact of 3-D printed PLA-and chitosan-based scaffolds on human monocyte/macrophage responses: unraveling the effect of 3-D structures on inflammation.
      ].
      Moreover, the multiple combinations of natural and synthetic materials resulted in hybrid scaffolds that have helped advance cancer research in several ways, such that 2D culture models have not. Fig. 2 shows a schematic illustration of the scaffold-based 3D culture models. For example, several studies have used 3D Ca-alginate scaffolds as a cell culture platform for screening and testing the efficacy of anticancer drugs [
      • Bassi G.
      • Panseri S.
      • Dozio S.M.
      • et al.
      Scaffold-based 3D cellular models mimicking the heterogeneity of osteosarcoma stem cell niche.
      ]. Also, malignant breast cancer cell lines (MCF-7 and JIMT-1) are fusiform, flat, and epithelioid in 2D culture plates; but grow small, round, and form aggregates and spheroids on 3D electrospun Poly(e–caprolactone) (PCL) mats Furthermore, breast cancer cell lines were compared with dermal fibroblasts, which grow in a spread pattern and elongated structures.
      Fig 2
      Fig 2Schematic illustration of scaffold-based 3D culture models. (A) natural hydrogels in which tumor cancer cells arrangement cannot replicate tumor heterogenicity; (B) modification of hydrogels with inorganic nanoparticles and growth factors, and spheroid cells have improved the understating of the tumor microenvironment; (C) Electrospinning techniques allow the fabrication of nanostructural three-dimensional scaffolds. The scaffolds mimic the extracellular matrix (ECM) and provide biochemical signals needed for cell-ECM communications.TC, Taylor cone; GACS; grounded aluminum collecting surface.
      Consistent with this concept, prostate cancer cells grown on porous sphere-template poly (2 hydroxyethyl methacrylate) (PHEMA) show tumorigenic response, comparing to non-porous PHEMA the cells only respond in the presence of Matrigel™ [
      • Long T.J.
      • Sprenger C.C.
      • Plymate S.R.
      • et al.
      Prostate cancer xenografts engineered from 3D precision-porous poly (2-hydroxyethyl methacrylate) hydrogels as models for tumorigenesis and dormancy escape.
      ]. It is essential to mention that functional peptides' integration actively serves as docking sites for interacting proteins. For example, CD44+/CD24- breast cancer cell culture in 3D self-assembling 16 residue peptide (RADA16) nanofiber scaffolds reverted their stem phenotype, reduced migration and invasion capabilities, and compared to type I collagen and Matrigel cultures [
      • Mi K.
      • Xing Z.
      CD44+/CD24− breast cancer cells exhibit phenotypic reversion in three-dimensional self-assembling peptide RADA16 nanofiber scaffold.
      ].
      Hybrid scaffold models have been employed for many cancer types. For example, MDA-MB31 gastric cancer cells were cultured in a scaffold composed of Poly Lactic-co-Glycolic Acid (PLGA) fibers and a GelMA hydrogel. The cells showed heterogeneous features; a fraction of cells showed a cancer stem cell-like phenotype, and other populations underwent EMT [
      • Pal M.
      • Chen H.
      • Lee B.H.
      • et al.
      Epithelial-mesenchymal transition of cancer cells using bioengineered hybrid scaffold composed of hydrogel/3D-fibrous framework.
      ]. Similarly, Young et.al developed the platform “TRACER”, a collagen and cellulose tissue roll scaffold for radiation therapy screening using the FaDu cell and primary cancer-associated fibroblast stromal cells. The cell lines were cultured into a cellulose layer, and the first layer was formed by the cancer-associated fibroblast followed by a central collagen/agarose layer and a FaDu cell layer on the top. Then, cell layers (TRACER) were rolled onto an acrylic core, placed into a custom-made 50 ml tube, and then subjected to 5- or 10-Gray radial arc radiation. The results indicate that cancer-associated fibroblasts were not capable of offering radioprotective behavior. Although the results are not fully corroborated, the platforms showed a potential tool to study tumor response to radiation [
      • Young M.
      • Rodenhizer D.
      • Dean T.
      • et al.
      A TRACER 3D Co-Culture tumour model for head and neck cancer.
      ].
      In summary, the choice of materials is crucial for successful scaffold fabrication, and natural polymeric scaffolds with low immunogenic properties are popular options for in vitro culture models, though they have some limitations. The scaffold's pore size and pore interconnectivity are also essential features to consider in scaffold design. Hydrogels can capture vast quantities and retain a 3D structure, but cancer cell arrangement upon incorporation is a crucial parameter to be evaluated. Furthermore, synthetic polymers are a popular choice for the fabrication of 3D scaffolds due to their high biocompatibility, degradability, and resorption, and can be used with standard processing techniques.

      3. 3D printing methods for cancer microenvironment

      The main disadvantage of existing cancer models is the inability of these 3D tumor models to replicate identical human physiological conditions and related functioning. Biofabrication of native tumor-like microenvironments with comparable cellular and ECM compositions and architectures can significantly enhance the investigation of cancer molecular and biological processes. 3D bioprinting is an emerging biofabrication technology in many areas, including tissue engineering and cancer research. It allows customization of precise spatial arrangements of multiple materials, cell types, and diverse extracellular matrix (ECM) components within a construct to simulate the cancer microenvironment (Fig 3) [
      • Augustine R.
      • Kalva S.N.
      • Ahmad R.
      • et al.
      3D Bioprinted cancer models: revolutionizing personalized cancer therapy.
      ,
      • Dubey N.
      • Ferreira J.A.
      • Daghrery A.
      • et al.
      Highly tunable bioactive fiber-reinforced hydrogel for guided bone regeneration.
      ]. Current 3D printed cancer models have shown in vivo tumor behaviors such as high growth rate, aggressive invasiveness, angiogenesis, metastasis and high resistance to anticancer drugs (Table 2) [
      • Jain P.
      • Kathuria H.
      • Dubey N.
      Advances in 3D bioprinting of tissues/organs for regenerative medicine and in-vitro models.
      ]. By designing constructs to reproduce cell-cell and cell-ECM interactions, dynamic progression of carcinoma development can be studied in detail [
      • Kronemberger G.S.
      • Miranda G.A.
      • Tavares R.S.
      • et al.
      Recapitulating tumorigenesis in vitro: opportunities and challenges of 3D Bioprinting.
      ]. In a general workflow, a 3D model of the desired construct is designed and generated using computer-aided design (CAD) software. The 3D model file can then be transferred into slicing software, where parameters such as layer thickness and print path can be determined. Upon slicing, the software generates a G-code file to relay various print settings to the 3D printer. During printing, materials are deposited layer-by-layer and subsequently into the designed 3D model [
      • Anderson M.
      • Dubey N.
      • Bogie K.
      • et al.
      Three-dimensional printing of clinical scale and personalized calcium phosphate scaffolds for alveolar bone reconstruction.
      ].
      Fig 3
      Fig 3Schematic representation of the 3D bioprinted model tissue that mimic the cancer microenvironment.
      Different 3D printing techniques are being utilized to biofabricate 3D in vitro cancer models that may be used as preclinical drug testing platforms and serve as bridges between in vivo and human testing (Fig. 4). The choice of 3D printing technique depends on the type of biomaterial used to mimic the tumor microenvironment, desired biomechanical properties, and complexity of the model. The most common 3D printing techniques used for 3D cancer models are stereolithography, inkjet-based, extrusion-based, direct light-patterning-based printing, and laser-assisted printing [
      • Aytac Z.
      • Dubey N.
      • Daghrery A.
      • et al.
      Innovations in craniofacial bone and periodontal tissue engineering–from electrospinning to converged biofabrication.
      ,
      • Samavedi S.
      • Joy N.
      3D printing for the development of in vitro cancer models.
      ].
      Fig 4
      Fig 4Various examples of 3D printed cancer models using different 3D printing techniques. Reproduced with permission from Shukla et.al
      [
      • Shukla P.
      • Yeleswarapu S.
      • Heinrich M.A.
      • et al.
      Mimicking tumor microenvironment by 3D bioprinting: 3D cancer modeling.
      ]
      .
      Stereolithographic (SLA) printing uses light of specific wavelengths to polymerize liquid polymers into thin layers. Ultraviolet (UV) light sources are commonly used to trigger photocrosslinking of materials and cure liquids in a rapid and consistent manner. SLA offers high print resolution with great structural integrity, complexity, and cell viability [

      Crook J.M. 3D Bioprinting. Methods in molecular biology, Bd 2020, 2140.

      ]. Therefore, limited by photopolymers, SLA has a narrow range of material choices. Photopolymers such as polyethylene glycol dimethylacrylate (PEGDMA), polyethylene glycol diacrylate (PEGDA), or GelMA with photo-crosslinkers are used in SLA bioprinting to serve as scaffolds for cell attachment or as a printed tissue [
      • Kafle A.
      • Luis E.
      • Silwal R.
      • et al.
      3D/4D Printing of polymers: fused deposition modelling (FDM), selective laser sintering (SLS), and stereolithography (SLA).
      ].
      SLA in cancer models utilizes its high print resolution, where refined structures with high complexity can be recreated. In a breast cancer model, nano-ink with hydroxyapatite nanoparticles in the hydrogel serves as a bioink to mimic the role of the bone-specific environment in breast cancer metastasis [
      • Zhu W.
      • Holmes B.
      • Glazer R.I.
      • et al.
      3D printed nanocomposite matrix for the study of breast cancer bone metastasis.
      ,
      • Cui H.
      • Esworthy T.
      • Zhou X.
      • et al.
      Engineering a novel 3D printed vascularized tissue model for investigating breast cancer metastasis to bone.
      ]. In an ovarian cancer model, a mini-scaffold composed of polycaprolactone (PCL) was fabricated and placed into 96-well plates for culturing. GelMA with cells was loaded onto the scaffold for investigation of the cancer microenvironment [
      • Parrish J.
      • Lim K.
      • Baer K.
      • et al.
      A 96-well microplate bioreactor platform supporting individual dual perfusion and high-throughput assessment of simple or biofabricated 3D tissue models.
      ].
      Extrusion-based bioprinting (EBB) refers to continuous streamline dispensing of material through pneumatic or mechanical pressure [
      • Parrish J.
      • Lim K.
      • Baer K.
      • et al.
      A 96-well microplate bioreactor platform supporting individual dual perfusion and high-throughput assessment of simple or biofabricated 3D tissue models.
      ]. Unlike SLA, which is restricted to photopolymers, EBB has a wider range of material choices [
      • Aytac Z.
      • Dubey N.
      • Daghrery A.
      • et al.
      Innovations in craniofacial bone and periodontal tissue engineering–from electrospinning to converged biofabrication.
      ]. Viscous gel-like bioinks are often used to ensure stable structure. With simple modular design, conventional extrusion-based printers incorporate multiple print heads to construct various materials at once [
      • Ramesh S.
      • Harrysson O.L.
      • Rao P.K.
      • et al.
      Extrusion bioprinting: recent progress, challenges, and future opportunities.
      ]. However, the resolution of the construct depended on the microextrusion nozzle head gage. Layering by pattern-drawing motion results in a slower printing process, and with shear stress created by passing cells through the nozzle head, cell viability can be compromised [
      • Cui H.
      • Esworthy T.
      • Zhou X.
      • et al.
      Engineering a novel 3D printed vascularized tissue model for investigating breast cancer metastasis to bone.
      ]. Parameters including material concentration, nozzle gage size, and dispensing pressure should be optimized for each cell-material combination for the best viability and ink flow [
      • Dubey N.
      • Ferreira J.A.
      • Malda J.
      • et al.
      Extracellular matrix/amorphous magnesium phosphate bioink for 3D bioprinting of craniomaxillofacial bone tissue.
      ]. Popular materials in EBB include collagen, gelatin, alginate, and GelMA, which serve as scaffolds for cell attachment and precise shape formation.
      As the most economical method of bioprinting, EBB is the most widely used technology for various cancer models. 3D printed mini-brain model for glioblastoma (GBM) was fabricated by including GBM-associated macrophages and GBM multiforme cells. It was comparable to GBM samples from over 150 patients [
      • Yi H.-.G.
      • Jeong Y.H.
      • Kim Y.
      • et al.
      A bioprinted human-glioblastoma-on-a-chip for the identification of patient-specific responses to chemoradiotherapy.
      ]. In 2014, an EBB 3D pancreatic tumor model was filed for patency. It has been reported to recreate oncogenic signaling processes by bioprinting with stromal bioinks. Microenvironment establishment is not achievable in 2D or spheroid cultures [

      Sears R, Allen-Petersen B, Langer E. Three-dimensional bioprinted pancreatic tumor model. Google Patents: 2016.

      ]. In a hepatocarcinoma model, EBB was used to construct vasculature with multiple cell types and ECM using precise co-printing [
      • Kolesky D.B.
      • Truby R.L.
      • Gladman A.S.
      • et al.
      3D bioprinting of vascularized, heterogeneous cell-laden tissue constructs.
      ].
      Inspired by conventional inkjet printers, inkjet bioprinters deposit materials such as ink sprays. Cells or materials are dispensed in microdroplets of ∼50 µm diameter with high throughput in a non-contact and precise drop-on-demand manner [
      • Li X.
      • Liu B.
      • Pei B.
      • et al.
      Inkjet bioprinting of biomaterials.
      ]. Low-viscosity liquids are frequently used as bioinks. Multiple micro nozzle print heads were installed to spray a large volume of droplets efficiently with the flexibility to incorporate multiple materials simultaneously. Contactless and high-speed dispensing ensures better cell viability than extrusion-based bioprinting, despite sharing similar concerns regarding shear stresses at nozzle heads. The disadvantage of inkjet bioprinting is the lack of precise deposition of each ink droplet. The material viscosity must be optimized to prevent nozzle head clogging [11] Dilute agarose, collagen, alginate, GelMA, and Matrigel™ were used for inkjet printing. The spraying nature of inkjet printing enables large-tissue construction with the specific incorporation of different cell types.
      Drop-on-demand printing with multiple cell types is often adopted for inkjet bioprinting. A GBM model comprising endothelial, stromal, and cancer cells loaded with collagen type-1 was co-printed using multiple inkjet nozzles. A vascular system construct was created to successfully mimic the spread of neuroblastoma [
      • Duarte Campos D.F.
      • Bonnin Marquez A.
      • O'Seanain C.
      • et al.
      Exploring cancer cell behavior in vitro in three-dimensional multicellular bioprintable collagen-based hydrogels.
      ]. The high-throughput nature of inkjet bioprinting was used in an ovarian coculture model. A reproducible model with a controlled cell density was fabricated. Human ovarian cancer cell OVCAR-5 and fibroblast co-culture micropatterning on Matrigel™ were modeled for systematic investigation [
      • Xu F.
      • Celli J.
      • Rizvi I.
      • et al.
      A three-dimensional in vitro ovarian cancer coculture model using a high-throughput cell patterning platform.
      ].
      Digital light processing (DLP) 3D printing technology uses a projected light source to cure the entire layer and enables improved speed for the fabrication of complex 3D geometries and precise control over material properties [
      • Ma X.
      • Qu X.
      • Zhu W.
      • et al.
      Deterministically patterned biomimetic human iPSC-derived hepatic model via rapid 3D bioprinting.
      ]. To investigate the influence of HCC growth and invasion on 3D matrix stiffness, a hepatocellular carcinoma (HCC) model was created using HepG2 cell-laden liver dECM-based, Col-I, and GelMA bioinks with variable matrix stiffness. Imaging of stromal invasion behavior from nodules with diseased liver stiffness was made possible by 3D bioprinted hexagonal nodules of varying stiffness. Interestingly, stiffer scaffold demonstrated more invasive and migratory capacity at both the genetic and phenotypic levels [
      • Ma X.
      • Yu C.
      • Wang P.
      • et al.
      Rapid 3D bioprinting of decellularized extracellular matrix with regionally varied mechanical properties and biomimetic microarchitecture.
      ]. Another team studied the effects of ECM stiffness on glioblastoma using bioinks consisting of glycidyl methacrylate hyaluronic acid (stiff) and gelatin methacrylate (soft). The stiffer model demonstrated extensive infiltration of tumor cells and increased resistance to temozolomide. Meanwhile, the soft models enrich the classical subtype and promote expansive cell proliferation [
      • Tang M.
      • Tiwari S.K.
      • Agrawal K.
      • et al.
      Rapid 3D bioprinting of glioblastoma model mimicking native biophysical heterogeneity.
      ]. In addition, DLP demonstrated controllable spatial architecture within a conventional 96-well cell culture, which is capable of high-throughput cancer models for preclinical drug screening [
      • Hwang H.H.
      • You S.
      • Ma X.
      • et al.
      High throughput direct 3D bioprinting in multiwell plates.
      ].
      Laser-assisted printing utilizes laser energy to pattern cell-laden bioinks in a three-dimensional spatial arrangement with the aid of computer-aided design and manufacturing. Pancreatic ductal adenocarcinoma was bioprinted using (GelMA), composed of both acinar and ductal cells, to mimic the initial stages of adenocarcinoma. The model displayed high cell viability and the expression of pancreatic cancer-specific markers [
      • Hakobyan D.
      • Medina C.
      • Dusserre N.
      • et al.
      Laser-assisted 3D bioprinting of exocrine pancreas spheroid models for cancer initiation study.
      ]. Similarly, multicellular tumor spheroids were processed using core–shell structures with cancer cells, and stem cells showed high cell viability. Furthermore, the influence of tumor spheroid size on transferrin internalization, a typical ligand for targeted treatment, shows increased spatial heterogeneity in large aggregates [
      • Kingsley D.M.
      • Roberge C.L.
      • Rudkouskaya A.
      • et al.
      Laser-based 3D bioprinting for spatial and size control of tumor spheroids and embryoid bodies.
      ].
      Some of the 3D bioprinted cancer models are summarized in Table 3, which shows the various bioprinting techniques that have been used to mimic tumor microenvironment features. In summary, biofabrication of 3D in vitro cancer models using 3D printing technologies offers a promising platform for investigating cancer's molecular and biological processes, as well as pre-clinical drug testing. 3D bioprinting enables the precise spatial arrangement of multiple materials, cell types, and diverse extracellular matrix (ECM) components within a construct to simulate cancer microenvironments with comparable cellular, ECM composition, and architecture to native tumors. The choice of printing technique depends on the type of biomaterials used to mimic tumor microenvironment, desired biomechanical property, and complexity of the model.
      Table 33DBP studies of the various cancer tumor microenvironment.
      Cancer TypeCell TypeBioink/ Material3D Bioprinting MethodOutcomeRef
      GlioblastomaGlioma cell line U118 and endothelial cellsCollagen or dECM hydrogelEBBPatient specific ex-vivo model of glioblastoma with anatomical organization is created. Oxygen gradient leading to hypoxia environment is mimicked.
      • Yi H.-.G.
      • Jeong Y.H.
      • Kim Y.
      • et al.
      A bioprinted human-glioblastoma-on-a-chip for the identification of patient-specific responses to chemoradiotherapy.
      Patient samples were incorporated on chip for drug combination treatment and analysis.
      Human glioma stem cell GSC23 (shell); Human glioma cells U118 (core)Sodium AlginateCoaxial EBBDrug resistance comparison between core-shell group and core-only group was done. Core-shell group shows higher protein and mRNA expression of treatment resistance markers. Making a potential model for drug test
      • Wang X.
      • Li X.
      • Dai X.
      • et al.
      Coaxial extrusion bioprinted shell-core hydrogel microfibers mimic glioma microenvironment and enhance the drug resistance of cancer cells.
      Glioma stem cells SU3; Human glioma cell line U87Gelatin, alginate, and fibrinogenEBB3D construct with customizable shapes and sizes were printed. Cells cultured in 3D constructs were found to have higher invasiveness and drug resistance than 2D culture.
      • Dai X.
      • Ma C.
      • Lan Q.
      • et al.
      3D bioprinted glioma stem cells for brain tumor model and applications of drug susceptibility.
      Hepatoma HepG2 and glioma cell U251Alginate; Polydimethylsiloxane (PDMS) baseDBB (Inkjet)Precise micropatterning of co-cultured cell droplets were loaded onto microfluidic chips. Drug diffusion gradient over the distance is studied, cell viability can be assessed from the dosage gradient
      • Zhang J.
      • Chen F.
      • He Z.
      • et al.
      A novel approach for precisely controlled multiple cell patterning in microfluidic chips by inkjet printing and the detection of drug metabolism and diffusion.
      iPSC-derived human neural progenitor cells;Human glioma cells U118; Human glioma cells GBM4; Mouse CD1 and C57BL neural progenitor cell-derived spheroidScaffold-free 3D cultureEBBSpheroid co-culture with spatial arrangement was made to observe the invasive behavior of glioblastoma
      • van Pel D.M.
      • Harada K.
      • Song D.
      • et al.
      Modelling glioma invasion using 3D bioprinting and scaffold-free 3D culture.
      Human glioma stem cell line, U118Sodium alginate and gelatinEBBCell-laden hydeogel scaffolds are created. mRNA expression for cell migration, angiogenesis and proliferation were greatly enhanced in 3D printed model
      • Wang X.
      • Dai X.
      • Zhang X.
      • et al.
      3D bioprinted glioma cell-laden scaffolds enriching glioma stem cells via epithelial–mesenchymal transition.
      Mouse macrophages cells RAW264.7;Mouse glioblastoma cells GL261GelMAEBBInvestigated the role of Glioblastoma-associated macrophages (GAMs) in cancer development through 3D printed co-culture. The model was able to quantify cell migration in 3D spatial arrangement, potentially an effective way to study immunemodulatory and chemotherapy responses
      • Wang X.
      • Dai X.
      • Zhang X.
      • et al.
      3D bioprinted glioma cell-laden scaffolds enriching glioma stem cells via epithelial–mesenchymal transition.
      Human primary umbilical cord-derived mesenchymal stromal cells (UC-MSC, referred to as MSCs), HUVEC, and human bone marrow-derived epithelial-neuroblastoma immortalized cells (SH-SY5Y)Agarose and type-I collagenDBBStable bioprintable collagen hydrogel was optimized without contraction. Cancer cells formed Homer Wright-Like Rosettes in the model, recreating the histological pattern similar to high-risk patients’ samples. The model is suitable for studying cancer development and serves as the first line in therapy medicine test.
      • Duarte Campos D.F.
      • Bonnin Marquez A.
      • O'Seanain C.
      • et al.
      Exploring cancer cell behavior in vitro in three-dimensional multicellular bioprintable collagen-based hydrogels.
      Breast tumorImmortalized non-tumorigenic human breast epithelial cell line MCF-12A; Breast carcinoma cell lines MCF-7 and MDA-MB-468Neutralized rat tail collagen I; Human collagen I VitroCol; Growth-factor reduced Matrigel (Geltrex)EBBReproduceable mammary epithelial organoids were generated. At day 21, a large duct-like structure was observed, potentially generating larger tissue to investigate breast carcinogenesis
      • Reid J.A.
      • Mollica P.A.
      • Bruno R.D.
      • et al.
      Consistent and reproducible cultures of large-scale 3D mammary epithelial structures using an accessible bioprinting platform.
      Normal breast epithelial cells HMLE; Twist-transformed cells HMLETPoly (ethylene glycol) diacrylateLBBWith different stiffness of substrates, behavior of HMLE and HMLET are similar in 2D culture for growth displacement, velocity, and straightness. 3D culture, however, shown a significantly higher migration of HMLET over stiff substrate, displaying a more promising cancer migration process over 2D culture.
      • Soman P.
      • Kelber J.A.
      • Lee J.W.
      • et al.
      Cancer cell migration within 3D layer-by-layer microfabricated photocrosslinked PEG scaffolds with tunable stiffness.
      MCF-7 BC cellsPBS solutionDBBThe 3D printed model have shown higher resistant to Tamoxifen, mimicking the in vivo response
      • Campbell A.
      • Philipovskiy A.
      • Heydarian R.
      • et al.
      2D and 3D thermally bioprinted human MCF-7 breast cancer cells: a promising model for drug discovery.
      Immortalized non-tumorigenic human breast epithelial cell line, MCF-12A, and the breast carcinoma cell lines MCF-7 and MDA-MB-468Rat tail collagenEBBThe study shows that a low-cost bioprinting platform can be used to increase tumoroid formation in 3D collagen gels, generate precise tumoroid arrays, and mimic in vivo findings.
      • Reid J.A.
      • Palmer X.-.L.
      • Mollica P.A.
      • et al.
      A 3D bioprinter platform for mechanistic analysis of tumoroids and chimeric mammary organoids.
      MCF-7 cellGelatin, Poly(ethylene glycol) dimethacrylate substrate for well formationDBBPrecise, high throughput and consistent printing of droplets for spheroid development. A time-saving method to prepare for tumor-on-chip study
      • Ling K.
      • Huang G.
      • Liu J.
      • et al.
      Bioprinting-based high-throughput fabrication of three-dimensional MCF-7 human breast cancer cellular spheroids.
      Breast cancer cells BT474; Human perinatal foreskin fibroblasts BJ and human adult dermal fibroblasts HDF for Integration-free human induced pluripotent stem cells (iPSCs) generationPoly(ethylene glycol) diacrylate (PEGDA)LBBSpheroid simulating cancer hypoxic core were printed in a high throughput manner. With both low and high cell seeding density, both sample sets were able to reach a similar final diameter.
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      • Finlay D.
      • Ma X.
      • et al.
      Nonlinear 3D projection printing of concave hydrogel microstructures for long-term multicellular spheroid and embryoid body culture.
      Primary breast cancer cells (21PT) and ADMSCMethacrylated hyaluronic acid, GelatinEBBADMSC was printed with various thickness to simulate tumor stiffness. Cancer drug resistance is investigated.
      • Wang Y.
      • Shi W.
      • Kuss M.
      • et al.
      3D bioprinting of breast cancer models for drug resistance study.
      Breast epithelial cell lines MCF10A, MCF10A-NeuN, MDA-MB-231, and MCF-7Matrigel, Gelatin, CollagenCoaxial EBBAll three types of bioinks were successfully printed and cell viability was compared. Spheroid co-culture was printed with different cell combinations for drug tests to show different interactions
      • Swaminathan S.
      • Hamid Q.
      • Sun W.
      • et al.
      Bioprinting of 3D breast epithelial spheroids for human cancer models.
      Alginate
      Mouse fibroblast (L929)AlginateEBBSuccessful simple viable 3D structure through a low-cost 3D printer,
      • Polley C.
      • Mau R.
      • Lieberwirth C.
      • et al.
      Bioprinting of three dimensional tumor models: a preliminary study using a low cost 3D printer.
      Breast cancer cell lines of distinct subtypes, luminal (MCF-7), basal like (HCC1143), HER2 amplified (SKBR3), and claudin low (MDA-MB-231)Alginate and gelatinEBBTherapeutic efficacy and genetic expression of microenvironment of 3D printed breast cancer models was investigated. In addition, the research went further to construct pancreatic cancer model with primary patient derived tumor cells for drug treatment.
      • Langer E.M.
      • Allen-Petersen B.L.
      • King S.M.
      • et al.
      Modeling tumor phenotypes in vitro with three-dimensional bioprinting.
      IMR-90 fibroblast cells and MDA-MB-231 cancer cellsAlginate and gelatinEBBCell migration in a customized 3D printed construct was studied. Recruitment of fibroblasts by the cancer cells was visualized over 30 days, The model could be further explored for therapeutic tests or metastasis studies.
      • Jiang T.
      • Munguia-Lopez J.G.
      • Flores-Torres S.
      • et al.
      Directing the self-assembly of tumour spheroids by bioprinting cellular heterogeneous models within alginate/gelatin hydrogels.
      Primary human bone marrow cells MSCs; Human adenocarcinoma BrCa cell line MDA-MB-231GelMA and nanocrystalline hydroxyapatite nHALBBModel for breast cancer metastasis is constructed. Co-culture of MSC and BrCa under 3D condition shows enhance proliferation of BrCa and inhibited MSC growth.
      • Zhou X.
      • Zhu W.
      • Nowicki M.
      • et al.
      3D bioprinting a cell-laden bone matrix for breast cancer metastasis study.
      Primary human bone marrow cells MSCs; Human adenocarcinoma BrCa cell line MDA-MB-231Poly-lactic acid (PLA); Modified nHAEBBVaried pore sizes and geometry of 3D printed bone scaffold were used to investigate the adhesiveness and proliferation of BrCa cells.

      Holmes B, Zhu W, Zhang LG. Development of a novel 3D bioprinted in vitro nano bone model for breast cancer bone metastasis study. MRS Online Proceedings Library (OPL) 2014, 1724.

      Human adenocarcinoma BrCa cell line MDA-MB-231; Human fetal osteoblast cell line hFOBPEG hydrogel and nHASLAArtificial bone scaffold was fabricated. 3D culture was able to demonstrate the osteoblast recruitment upon cancer development, simulating the metastatic behavior.
      • Zhu W.
      • Castro N.J.
      • Cui H.
      • et al.
      A 3D printed nano bone matrix for characterization of breast cancer cell and osteoblast interactions.
      Human adenocarcinoma BrCa cell line MDA-MB-231; human bone marrow cells MSCs; Human breast cancer cells MCF-7PEG, PEGDA, and nHASLAVarious pore shape and sizes of bone matrices were printed and characterized. Migration of cells was studied.
      • Zhu W.
      • Holmes B.
      • Glazer R.I.
      • et al.
      3D printed nanocomposite matrix for the study of breast cancer bone metastasis.
      Ovarian cancerHuman epithelial ovarian cancer cell lineOVCAR-5; Normal human fibroblast cell line MRC-5MatrigelDBBMicropatterning of OVCAR-5 and MRC-5 was achieved, cell number and viability per droplet of bioink were characterized.
      • Xu F.
      • Celli J.
      • Rizvi I.
      • et al.
      A three-dimensional in vitro ovarian cancer coculture model using a high-throughput cell patterning platform.
      Human ovarian cancer cell line OVCAR-5; Normal human fibroblasts MRC-5; Human primary umbilical vein endothelial cells HUVECMatrigelDBBThis work is in line with (79). 3D Model of micrometastatic OvCa was fabricated. Co-migration of OVCAR-5 and MRC-5 were observed. When fibroblast is printed closer toOVCAR-5, tumor size dramatically increased over 14 days.
      • Rizvi I.
      • Celli J.P.
      • Xu F.
      • et al.
      Optical methods for tumor treatment and detection: mechanisms and techniques in photodynamic therapy XX.
      Human ovarian cancer cell line (SKOV3) and human foreskin-derived fibroblasts (HFF)GelMA; Gelatin-norbornene (gel-NOR); PCLSLASKOV3-HFF co-culture was captured in PCL scaffold and cultured in 96-well plate. With bioreactor, reproduceable and high throughput screening was achieved.
      • Parrish J.
      • Lim K.
      • Baer K.
      • et al.
      A 96-well microplate bioreactor platform supporting individual dual perfusion and high-throughput assessment of simple or biofabricated 3D tissue models.
      Hepato-carcinomahiPSC-derived hepatic progenitor cells hiPSC-HPCs (Derived from human perinatal foreskin fibroblasts and human adult dermal fibroblasts); Human umbilical vein endothelial cell HUVEC; Adipose-derived stem cells ADSCGelMA; Glycidal methacrylate-hyaluronic acid (GMHA)LBBSpecial 3D hepatic triculture models were printed. Tri-cultured cells reorganization and realignment were observed. Genetic expression indicated high maturity of cells in the model
      • Ma X.
      • Qu X.
      • Zhu W.
      • et al.
      Deterministically patterned biomimetic human iPSC-derived hepatic model via rapid 3D bioprinting.
      OsteosarcomaHOS, 143B and U2-OS (human osteosarcoma cell lines)GelMA, HAMAEBBRNA-Seq, qPCR and chemotherapeutic drug cytotoxicity evaluation have screened across 2D culture, spheroid culture and 3D bioprinted model culture. Autophagy response was found to be prominent in bioprinted model
      • Lin Y.
      • Yang Y.
      • Yuan K.
      • et al.
      Multi-omics analysis based on 3D-bioprinted models innovates therapeutic target discovery of osteosarcoma.
      Pancreatic adenocarcinomaHuman pancreatic cancer cells CD18; Human umbilical vein endothelial cell HUVECAlginate and gelatinEBBA patent of 3D printed model capable of mimicking in vivo primary patient cell xenograft result.

      Sears R, Allen-Petersen B, Langer E. Three-dimensional bioprinted pancreatic tumor model. Google Patents: 2016.

      Cervical tumorHuman cervical cancer HeLa cellsGelatin, Alginate, FibrinogenEBBThrough cell proliferation analysis, 3D bioprinted model shows higher cell density and stronger resistance to drug treatment, simulating a more accurate cancer microenvironment.
      • Zhao Y.
      • Yao R.
      • Ouyang L.
      • et al.
      Three-dimensional printing of Hela cells for cervical tumor model in vitro.
      EBB: Extrusion-based bioprinting, DBB: Droplet-based bioprinting, LBB: Light-based printing, SLA: Stereolithography.

      4. Future research directions and concluding remarks

      The development of effective cancer treatments is a complex process due to tumor heterogeneity and inter-patient variations, which limits the success of therapeutic interventions. Traditional two-dimensional cell culture has been used to study cancer metabolism, but it fails to capture physiologically relevant cell-cell and cell-environment interactions required to mimic the tumor-specific architecture. The fabrication of 3D culture reproducible models is a significant advancement in cancer research. The use of 3D cancer models has shown potential in addressing this unmet need by capturing the cancer microenvironment, including cell-cell and cell-environment interactions, and bridging the gap between 2D cell culture and animal models. The recent emergence of 3D bioprinting as a novel biofabrication strategy has enabled the development of compartmentalized hierarchical organizations with precise positioning of biomolecules, including living cells, for the fabrication of 3D cancer models.
      Despite the benefits of 3D cancer models, there are limitations associated with technological advances, detailed applicative research, patient compliance, and regulatory challenges that must be addressed to achieve a successful bed-to-bench transition. The absence of a standardized approach to characterize the properties of bioink and printed materials in bioprinting poses difficulties in comparing models across the literature. The integration of advanced imaging techniques and computational modeling can further enhance the development of 3D cancer models. Additionally, the use of patient-derived cells and biomaterials with tuned stiffness in the fabrication of 3D cancer models could enable a more personalized approach for cancer treatment. It will be crucial to establish proper culture and research techniques, supported by comprehensive data on cancer genomics and proteomics, which will be essential in the optimization of relevant 3D models for predicting therapeutic outcomes for specific cancers. Smart polymers can be used to develop programmable tumor microenvironments by changing their volume or other properties in response to stimuli, such as pH, to mimic different stages of cancer. Taken together, the progress made in 3D models for studying the cancer microenvironment is significant in terms of understanding cancer development and drug response, and has the potential to provide groundbreaking solutions to replace animal models, ultimately transforming the healthcare industry.

      Declaration of Competing Interest

      The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

      Acknowledgements

      Fig 1 in this manuscript was created with https://BioRender.com.

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